Article

Decrypting viral dark matter through key proteins using an NLP-enhanced framework

2026-01-13

Abstract excerpt

<title>Abstract</title> <p> Viral sequences in diverse environments remain largely uncharacterized, impeding our comprehension of their genetic makeup, biological interactions, and potential applications. This underscores an urgent need for innovative analytical methods. Here we present the VirHost Hunter framework, which employs phage tails and lysins, bypassing the requirement for full genomes, for efficient a...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 97ebaae0-872e-5cb1-b7b4-267af975a976
DOI: 10.21203/rs.3.rs-8534670/v1

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Decrypting viral dark matter through key proteins using an NLP-enhanced frameworkDOI 10.21203/rs.3.rs-8534670/v1Read

The human gut virome is a non-redundant and clinically informative component of the microbiomeSemantic proximity Read

Enhanced multi-omic viral profiling from microbial community sequencing with BAQLaVaSemantic proximity Read

Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models, with PathogenFinder2Semantic proximity Read

Human Gut Phageome Analysis Uncovers Thousands of Highly Modular EndolysinsSemantic proximity Read

Decoding Huge Phage Diversity: A Taxonomic Classification of Lak MegaphagesSemantic proximity Read

The diverse functions of viral microproteinsSemantic proximity Read

HViLM: A Foundation Model for Viral Genomics Enables Multi-Task Prediction of Pathogenicity, Transmissibility, and Host TropismSemantic proximity Read

Decoding huge phage diversity: a taxonomic classification of Lak megaphages.Semantic proximity Read

ProkBERT PhaStyle: Accurate Phage Lifestyle Prediction with Pretrained Genomic Language ModelsSemantic proximity Read

VIBRANT: Automated recovery, annotation and curation of microbial viruses, and evaluation of virome function from genomic sequencesSemantic proximity Read

Illuminating the Virosphere’s Dark Matter using Hierarchical Deep LearningSemantic proximity Read

Phage Bioinformatics Tools: A Review of Computational Approaches for Bacteriophage ResearchSemantic proximity Read