Back to search

Article

Benchmarking small variant detection with ONT reveals high performance in challenging regions

2020-10-23

Abstract excerpt

<h4>Background</h4> The development of long read sequencing (LRS) has led to greater access to the human genome. LRS produces long read lengths at the cost of high error rates and has shown to be more useful in calling structural variants than short read sequencing (SRS) data. In this paper we evaluate how to use LRS data from Oxford Nanopore Technologies (ONT) to call small variants in regions in- and outside th...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
894b675e-33df-5546-a346-047146c4c362
DOI
10.1101/2020.10.22.350009
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Benchmarking small variant detection with ONT reveals high performance in challenging regionsDOI 10.1101/2020.10.22.350009
Select a neighboring publication to make it the new centre.