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CytoGate-Bench: an LLM benchmark for cross-panel cell gating in cytometry

2026-08-26

Abstract excerpt

<h4>SUMMARY</h4> In cytometry, the workhorse single-cell technology of clinical immunology, every study defines its own antibody panel and cell-type vocabulary, so a classifier trained on one cannot annotate the next. Immunologists instead annotate by manual gating, splitting one parent population at a time on a two-marker plot, down an expert-defined hierarchy. We introduce CytoGate-Bench, a benchmark that refor...

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Literature Corpus work
851ddb5d-3c17-57d7-95c8-9e32dd5f3a2f
DOI
10.64898/2026.08.24.746336
Open publication

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CytoGate-Bench: an LLM benchmark for cross-panel cell gating in cytometryDOI 10.64898/2026.08.24.746336
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