Article

Detection of patient metadata in published articles for genomic epidemiology using machine learning and large language models

2025-04-28

Abstract excerpt

<h4>Objective</h4> Patient metadata exist in published articles, but are often dis-connected from genome sequences in databases, limiting their utility for genomic epidemiology. The objective of this study was to develop and evaluate natural language processing methods to facilitate the large-scale detection of patient metadata associated with reports of genome sequencing in published articles, drawing on the case...

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Identifiers and source

Literature Corpus work: 85140255-2846-5068-9bd8-64964897f342
DOI: 10.1101/2025.04.25.25326298

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