Article

tUbe net: a generalisable deep learning tool for 3D vessel segmentation

2023-07-24

Abstract excerpt

<h4>ABSTRACT</h4> Deep learning has become an invaluable tool for bioimage analysis but, while open-source cell annotation software such as cellpose are widely used, an equivalent tool for three-dimensional (3D) vascular annotation does not exist. With the vascular system being directly impacted by a broad range of diseases, there is significant medical interest in quantitative analysis for vascular imaging. We p...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 817c5b86-afed-5a17-b067-2af2c662b341
DOI: 10.1101/2023.07.24.550334

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

tUbe net: a generalisable deep learning tool for 3D vessel segmentationDOI 10.1101/2023.07.24.550334Read

Anatomical modeling of brain vasculature in two-photon microscopy by generalizable deep learningSemantic proximity Read

3DVascNet: an automated software for segmentation and quantification of vascular networks in 3DSemantic proximity Read

Unsupervised segmentation of 3D microvascular photoacoustic images using deep generative learningSemantic proximity Read

BRAVE-NET: Fully Automated Arterial Brain Vessel Segmentation In Patients with Cerebrovascular DiseaseSemantic proximity Read

Segmentation and Measurements of Major Blood Vessels from CT Pulmonary Angiography Using Deep LearningSemantic proximity Read

Physics-informed deep generative learning for quantitative assessment of the retinaSemantic proximity Read

A deep learning approach for improving two-photon vascular imaging speedsSemantic proximity Read

Label-free phenotyping of human microvessel networksSemantic proximity Read

Compensating small data with large filters for accurate liver vessel segmentationSemantic proximity Read

Generalizable deep learning framework for 3D medical image segmentation using limited training dataSemantic proximity Read

Performance of Frangi–Hessian Pseudo-Labels for Retinal Vessel Segmentation in AI-Assisted Retinopathy of Prematurity ScreeningSemantic proximity Read

Vessel Metrics: A python based software tool for automated analysis of vascular structure in confocal imagingSemantic proximity Read