Article

Identification and Analysis of SARS-CoV-2 Mutation and Subtype using 2x tiled Primer Set with Oxford Nanopore Technologies Sequencing for Enhanced Variant Detection and Surveillance in Seoul, Korea

2023-12-05

Abstract excerpt

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a respiratory virus that contains RNA as its genetic material and has caused a global pandemic since its outbreak in 2020. This virus has many mutations, some of which can reduce the effectiveness of existing vaccines. Therefore, next-generation sequencing (NGS) is necessary to accurately identify new mutations. Current NGS analysis of SARS-CoV-2 uses...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 6b1872d6-6414-531c-b823-3e82442304e3
DOI: 10.1101/2023.12.03.569831

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Identification and Analysis of SARS-CoV-2 Mutation and Subtype using 2x tiled Primer Set with Oxford Nanopore Technologies Sequencing for Enhanced Variant Detection and Surveillance in Seoul, KoreaDOI 10.1101/2023.12.03.569831Read

Rapid and Inexpensive Whole-Genome Sequencing of SARS-CoV-2 using 1200 bp Tiled Amplicons and Oxford Nanopore Rapid BarcodingSemantic proximity Read

Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysisSemantic proximity Read

Molecular Genetic Analysis of SARS-CoV-2 Lineages in ArmeniaSemantic proximity Read

Rapid and inexpensive whole-genome sequencing of SARS-CoV-2 using 1200 bp tiled amplicons and Oxford Nanopore Rapid BarcodingSemantic proximity Read

Universal whole-genome Oxford nanopore sequencing of SARS-CoV-2 using tiled ampliconsSemantic proximity Read

Rapid Genomic Characterization of SARS-CoV-2 Viruses From Clinical Specimens Using Nanopore SequencingSemantic proximity Read

Rapid genomic characterization of SARS-CoV-2 viruses from clinical specimens using nanopore sequencing.Semantic proximity Read

Assessment of two‐pool multiplex long‐amplicon nanopore sequencing of SARS‐CoV‐2Semantic proximity Read

Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic WorkflowsSemantic proximity Read

SARS-CoV-2 genomes recovered by long amplicon tiling multiplex approach using nanopore sequencing and applicable to other sequencing platformsSemantic proximity Read

Evaluation on the use of Nanopore sequencing for direct characterization of coronaviruses from respiratory specimens, and a study on emerging missense mutations in partial RdRP gene of SARS-CoV-2Semantic proximity Read

Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysisSemantic proximity Read