Article

Real-time biomedical knowledge synthesis of the exponentially growing world wide web using unsupervised neural networks

2020-04-04

Abstract excerpt

Decoding disease mechanisms for addressing unmet clinical need demands the rapid assimilation of the exponentially growing biomedical knowledge. These are either inherently unstructured and non-conducive to current computing paradigms or siloed into structured databases requiring specialized bioinformatics. Despite the recent renaissance in unsupervised neural networks for deciphering unstructured natural language...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 6316de5d-2e78-5baa-81f9-6ee360a36c4d
DOI: 10.1101/2020.04.03.020602

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Real-time biomedical knowledge synthesis of the exponentially growing world wide web using unsupervised neural networksDOI 10.1101/2020.04.03.020602Read

Knowledge synthesis from 100 million biomedical documents augments the deep expression profiling of coronavirus receptorsSemantic proximity Read

<i>OmicsNavigator</i> : An auditable scientific partner for scalable hypothesis validation in spatial omicsSemantic proximity Read

Systematic tissue annotations of –omics samples by modeling unstructured metadataSemantic proximity Read

SigMine and OPathDb: A Literature-Mining Pipeline and Opportunistic Pathogen DatabaseSemantic proximity Read

ENQUIRE RECONSTRUCTS AND EXPANDS CONTEXT-SPECIFIC CO-OCCURRENCE NETWORKS FROM BIOMEDICAL LITERATURESemantic proximity Read

RD-OMICS: An Integrative Multi-Omics Data Inventory in Rare DiseasesSemantic proximity Read

Synonym Augmentation for Rare Disease Identification in Unstructured DataSemantic proximity Read

OnTheFly <sup>2.0</sup> : a text-mining web application for automated biomedical entity recognition, document annotation, network and functional enrichment analysisSemantic proximity Read

BioMedGraphica: An All-in-One Platform for Joint Textual Biomedical Prior Knowledge and Numeric Graph GenerationSemantic proximity Read

OmniCellTOSG: The First Cell Text-Omic Signaling Graphs Dataset for Graph Language Foundation ModelingSemantic proximity Read

Accurate Clinical Entity Recognition and Code Mapping of Anatomopathological Reports Using BioClinicalBERT Enhanced by Retrieval-Augmented Generation: A Hybrid Deep Learning ApproachSemantic proximity Read

Text mining biomedical literature to identify extremely unbalanced data for digital epidemiology and systematic reviews: dataset and methods for a SARS-CoV-2 genomic epidemiology studySemantic proximity Read