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One Health genomic surveillance of <i>Escherichia coli</i> demonstrates distinct lineages and mobile genetic elements in isolates from humans versus livestock

2018-10-03

Abstract excerpt

<h4>ABSTRACT</h4> Livestock have been proposed as a reservoir for drug-resistant Escherichia coli that infect humans. We isolated and sequenced 431 E. coli (including 155 ESBL-producing isolates) from cross-sectional surveys of livestock farms and retail meat in the East of England. These were compared with the genomes of 1517 E. coli associated with bloodstream infection in the United Kingdom. Phylogenetic co...

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Literature Corpus work
4f5b48bd-88c6-57e1-a86e-096e812b5843
DOI
10.1101/434001
Open publication

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