Article

TidyGEO: Preparing analysis-ready datasets from Gene Expression Omnibus

2023-02-10

Abstract excerpt

TidyGEO is a Web-based tool for downloading, tidying, and reformatting data series from Gene Expression Omnibus (GEO). As a freely accessible repository with data from over 4 million biological samples across more than 4,000 organisms, GEO provides diverse opportunities for secondary research. Transcriptomic data are most common in GEO, but other measurement types are also prevalent, including DNA methylation leve...

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Literature Corpus work: 4a536530-d2a1-51cd-a3f6-60e728155ec4
DOI: 10.1101/2023.02.09.527930

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