Article

RNA-Seq of Untreated Wastewater to Assess COVID-19 and Endemic Viruses

2022-06-27

Abstract excerpt

Background: The COVID-19 pandemic showcased the power of genomic sequencing to tackle the emergence and spread of infectious diseases. However, metagenomic sequencing of total microbial RNAs in wastewater has the potential to assess multiple infectious diseases simultaneously and has yet to be explored.<br><br>Methods: A retrospective RNA-Seq epidemiological survey of 140 untreated composite wastewater samples was...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 37523b05-c695-5326-a99e-1081b28f6dec
DOI: 10.2139/ssrn.4147539

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

RNA-Seq of Untreated Wastewater to Assess COVID-19 and Endemic VirusesDOI 10.2139/ssrn.4147539Read

RNA-Seq of untreated wastewater to assess COVID-19 and emerging and endemic viruses for public health surveillanceSemantic proximity Read

Towards a Comprehensive Wastewater Virome Atlas for Pathogen MonitoringSemantic proximity Read

Sewage surveillance for the presence of SARS-CoV-2 genome as a useful wastewater based epidemiology (WBE) tracking tool in IndiaSemantic proximity Read

Untargeted longitudinal ultra deep metagenomic sequencing of wastewater provides a comprehensive readout of expected and unexpected viral pathogensSemantic proximity Read

Monitoring of SARS-CoV-2 Variants by Wastewater-Based Surveillance as a Sustainable and Pragmatic Approach—A Case Study of Jaipur (India)Semantic proximity Read

Geospatially-resolved public-health surveillance via wastewater sequencingSemantic proximity Read

Wastewater surveillance of open drains for mapping the trajectory and succession of SARS-CoV-2 lineages in 23 class-I cities of Maharashtra State (India) during June 2022 to May 2023Semantic proximity Read

Respiratory virus infection dynamics and genomic surveillance to detect seasonal influenza subtypes in wastewater: a longitudinal study in Bengaluru, IndiaSemantic proximity Read

Detection of viruses of public health importance in wastewater samples using conventional PCR techniques and a targeted enrichment whole genome sequencing panelSemantic proximity Read

Viromic analysis of wastewater input to a river catchment reveals a diverse assemblage of RNA virusesSemantic proximity Read

Towards geospatially-resolved public-health surveillance via wastewater sequencingSemantic proximity Read

High throughput sequencing based detection of SARS-CoV-2 prevailing in wastewater of Pune, West IndiaSemantic proximity Read