Article

Text Mining miRNA-gene Interactions for the mx-plore Platform

2025-01-25

Abstract excerpt

miRNAs are post-transcriptional regulators which bind to the specific mRNA of expressed genes and induce increased mRNA degradation, thereby reducing the gene expression of their target genes. miRNAs perform their regulatory functions in a context-specific manner. Several databases contain collections of miRNA-target interactions, which are either experimentally validated, derived from high-throughput experiments,...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 30a6a9e5-23cc-5ea5-8a35-c966d9e3f550
DOI: 10.1101/2025.01.22.634367

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Text Mining miRNA-gene Interactions for the mx-plore PlatformDOI 10.1101/2025.01.22.634367Read

emiRIT: A text-mining based resource for microRNA informationSemantic proximity Read

miRNAtools: advanced training using the miRNA web of knowledgeSemantic proximity Read

An in silico analysis of microRNAs: mining the miRNAome.Semantic proximity Read

TransmiR: a transcription factor-microRNA regulation database.Semantic proximity Read

miRDRN – miRNA Disease Regulatory Network: A tool for exploring disease and tissue-specific microRNA regulatory networksSemantic proximity Read

Human.miRFFL.DB-A curated resource for human miRNA coregulatory networks and associated regulatory-circuitsSemantic proximity Read

A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites.Semantic proximity Read

Detecting miRNA Mentions and Relations in Biomedical LiteratureSemantic proximity Read

A Comprehensive Evaluation of Large Language Models in Mining Gene Interactions and Pathway KnowledgeSemantic proximity Read

miRFA: an automated pipeline for microRNA functional analysis with correlation support from TCGA and TCPA expression data in pancreatic cancerSemantic proximity Read

PRIMITI: a computational approach for accurate prediction of miRNA-target mRNA interactionSemantic proximity Read

miRNAs target databases: developmental methods and target identification techniques with functional annotations.Semantic proximity Read