Article

Image-based quantification of <i>Arabidopsis thaliana</i> stomatal aperture from leaf images

2022-11-30

Abstract excerpt

The quantification of stomatal pore size has long been a fundamental approach to understand the physiological response of plants in the context of environmental adaptation. Automation of such methodologies not only alleviates human labor and bias, but also realizes new experimental research methods through massive analysis. Here, we present an image analysis pipeline that automatically quantifies stomatal aperture...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 2e2b3496-3c29-54b8-ab7d-6d23e9f3efc4
DOI: 10.1101/2022.11.30.518467

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Image-based quantification of <i>Arabidopsis thaliana</i> stomatal aperture from leaf imagesDOI 10.1101/2022.11.30.518467Read

StomaAI: an efficient and user-friendly tool for measurement of stomatal pores and density using deep computer vision.Semantic proximity Read

Stomata Detector: High-throughput automation of stomata counting in a population of African rice ( <i>Oryza glaberrima</i> ) using transfer learningSemantic proximity Read

StomataCounter: a neural network for automatic stomata identification and countingSemantic proximity Read

LeafNet: a tool for segmenting and quantifying stomata and pavement cells.Semantic proximity Read

Labeled temperate hardwood tree stomatal image datasets from seven taxa of Populus and 17 hardwood species.Semantic proximity Read

StomataScorer: a portable and high-throughput leaf stomata trait scorer combined with deep learning and an improved CV model.Semantic proximity Read

Pathogen-specific stomatal responses in cacao leaves to Phytophthora megakarya and Rhizoctonia solaniSemantic proximity Read

RotatedStomataNet: a deep rotated object detection network for directional stomata phenotype analysis.Semantic proximity Read

Phenotiki: an open software and hardware platform for affordable and easy image-based phenotyping of rosette-shaped plants.Semantic proximity Read

EpiReasoner: An Integrated Artificial Intelligence Framework for Phenotype-to-Genotype Reasoning in Plant Epidermal DevelopmentSemantic proximity Read

Plant phenomics: an overview of image acquisition technologies and image data analysis algorithms.Semantic proximity Read

Machine learning-enabled computer vision for plant phenotyping: a primer on AI/ML and a case study on stomatal patterning.Semantic proximity Read