Article

denim: an R package for deterministic compartmental models with flexible dwell time distributions

2025-08-06

Abstract excerpt

Compartmental models are widely used for dynamical systems where states are discrete such as in infectious diseases epidemiology with the so-called SIR or Susceptible-Infectious-Recovered framework. For mathematical simplicity, rates of transition between compartments are generally assumed to be independent of the dwell time (or secondary time scale in survival analysis): they are either constant or dependent on t...

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Literature Corpus work: 25d013f0-b0c5-5df1-80bd-d7db9f73dc4a
DOI: 10.1101/2025.08.05.668369

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