Article

DeepEthogram: a machine learning pipeline for supervised behavior classification from raw pixels

2020-09-25

Abstract excerpt

Researchers commonly acquire videos of animal behavior and quantify the prevalence of behaviors of interest to study nervous system function, the effects of gene mutations, and the efficacy of pharmacological therapies. This analysis is typically performed manually and is therefore immensely time consuming, often limited to a small number of behaviors, and variable across researchers. Here, we created DeepEthogram...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 203f385b-dc0b-544a-93aa-91f59d074023
DOI: 10.1101/2020.09.24.312504

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

DeepEthogram: a machine learning pipeline for supervised behavior classification from raw pixelsDOI 10.1101/2020.09.24.312504Read

Deep-learning based identification, tracking, pose estimation, and behavior classification of interacting primates and mice in complex environmentsSemantic proximity Read

Action detection using a neural network elucidates the genetics of mouse grooming behaviorSemantic proximity Read

Powerful and interpretable behavioural features for quantitative phenotyping of Caenorhabditis elegans.Semantic proximity Read

A Hierarchical 3D-motion Learning Framework for Animal Spontaneous Behavior MappingSemantic proximity Read

Action detection using a neural network elucidates the genetics of mouse grooming behaviorSemantic proximity Read

REVEALS: An Open Source Multi Camera GUI For Rodent Behavior AcquisitionSemantic proximity Read

Simple Behavioral Analysis (SimBA) – an open source toolkit for computer classification of complex social behaviors in experimental animalsSemantic proximity Read

LISBET: a machine learning model for the automatic segmentation of social behavior motifsSemantic proximity Read

CASTLE: a training-free foundation-model pipeline for cross-species behavioral classificationSemantic proximity Read

Automated evaluation of cardiac contractile dynamics and aging prediction using machine learning in a Drosophila modelSemantic proximity Read

The Mouse Action Recognition System (MARS): a software pipeline for automated analysis of social behaviors in miceSemantic proximity Read

Behavior decoding delineates seizure microfeatures and associated sudden death risks in miceSemantic proximity Read