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Natural variation in WRKY53 confers cold tolerance at the booting stage between japonica and indica rice.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 23 Aug 2026

Yang Jiangli, Liu Changhua, Chen Zhuo, Zhai Tong, Tian Xiaojie, Bu Qingyun, Tang Jiaqi

Abstract excerpt

KEY MESSAGE: Natural variation at the WRKY53-C518G SNP drives cold tolerance divergence between rice subspecies. The japonica-specific WRKY53518C allele, originating from Chinese wild rice and selected in temperate regions, confers cold tolerance by reducing GA repression to protect pollen fertility, and thus provides a valuable target for rice breeding. Cold tolerance at the booting stage (CTB), when...

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PMID: 42634039
DOI: 10.1007/s00122-026-05339-x

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