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MianxinNo.1: a modern cultivar genome-informed SNP array based on cGPS technology for genomics-assisted breeding in cotton.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 18 Jul 2026

Zhang Xinyu, Sun Zhengwen, Cao Mingyue, Wang Hongzhe, Gu Qishen, Yang Jun, Tang Shunxue, Ke Huifeng, Zhang Dongmei, Wu Liqiang, Wang Zhaohui, Tian Bingchuan, Lu Huaiyu, Wang Xingfen, Zhang Yan, Ma Zhiying

Abstract excerpt

To overcome limitations in the applications of existing SNP arrays in cotton genotyping and genomic selection (GS), we developed a liquid-phase SNP array, CottonSNP10K, for genomics-assisted breeding in cotton. Based on the high-quality reference genome of modern upland cotton cultivar NDM8, CottonSNP10K achieves precise probe design, and its marker system innovatively integrates the modern breeding genetic...

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PMID: 42470460
DOI: 10.1007/s00122-026-05305-7

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