Lineage-specific variation and molecular evolution in the rice landrace Thavalakannan: an in silico framework for identifying candidate flood resilience-associated variants.

Abstract excerpt

MAIN CONCLUSION: This genomic atlas identifies unique Sub1 allelic diversity and 2,557 wild-derived non-reference genes in Thavalakannan, providing a molecular framework and SSR toolkit to accelerate precision breeding for flood resilient rice. Rice (Oryza sativa L.) landraces harbour untapped genetic diversity essential for climate-adaptive breeding. Thavalakannan, an endemic South Indian indica landrace, is...

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