Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Whole-genome phylogenetics of chikungunya virus from a clustered outbreak in China reveals IOL circulation.

Virology - 1 Aug 2026

Zhang Penghong, Pang Zhifeng, Zhu Shuying, Xu Qianqian, Fang Qionglou, Yang Chen, Yao Xiaojing, Zhang Bing

Abstract excerpt

Chikungunya virus (CHIKV) is an arthropod-borne Alphavirus of the family Togaviridae. In this study, four CHIKV whole-genome sequences (JH01/China Jinhua/2025 to JH04/China Jinhua/2025) were obtained from a clustered outbreak in Jinhua City, China, using Nanopore sequencing. Phylogenetic relationships were inferred via a maximum likelihood (ML) approach implemented in IQ-TREE, and genomic variation was...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Amino Acid Substitution
Share to Chikungunya Fever

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Chikungunya virus

Share to Disease Outbreaks

Share to Genome, Viral

Share to Phylogeny

Share to Whole Genome Sequencing

Source

Identifiers

PMID: 42068778
DOI: 10.1016/j.virol.2026.110939

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Whole-genome phylogenetics of chikungunya virus from a clustered outbreak in China reveals IOL circulation.PMID 42068778Read ↗

Comprehensive Genome Scale Phylogenetic Study Provides New Insights on the Global Expansion of Chikungunya Virus.Semantic proximity Read ↗

Genomic characterization of chikungunya virus during the large 2025 outbreak in Sri Lanka reveals emergence of a distinct Indian Ocean lineage strainSemantic proximity Read ↗

Genomic epidemiology reveals the origins and transmission dynamics of chikungunya virus in China.Semantic proximity Read ↗

Genomic characterization of a large-scale chikungunya outbreak in China.Semantic proximity Read ↗

Genomic Epidemiology of CHIKV During the Largest Outbreak in Mainland China-Implication for CHIKV interventionSemantic proximity Read ↗

Accurate Recapitulation of Chikungunya Virus Complete Coding Sequence Phylogeny Using Variable Genome Regions for Genomic Surveillance.Semantic proximity Read ↗

Molecular Epidemiology, Evolution and Reemergence of Chikungunya Virus in South AsiaSemantic proximity Read ↗

Genomic surveillance reveals multiple origins and local transmission of travel-associated chikungunya virus in Yunnan, China.Semantic proximity Read ↗

The Italian 2017 Outbreak Chikungunya Virus Belongs to an Emerging Aedes albopictus–Adapted Virus Cluster Introduced From the Indian SubcontinentSemantic proximity Read ↗

Updated Phylogeny of Chikungunya Virus Suggests Lineage-Specific RNA ArchitectureSemantic proximity Read ↗

Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates.Semantic proximity Read ↗

Clinical and molecular epidemiology of chikungunya outbreaks during 2019–2022 in IndiaSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.