Article
Population genomics reveals association of transposable elements variants with climatic adaptation in wild Amur grape.
Nature communications - 26 Feb 2026
Ma Zhiyao, Xu Xiaodong, Peng Wenjing, Zhang Tianhao, Chen Zhuyifu, Cao Shuo, Zhang Fan, Wang Yiwen, Xiao Hua, Zhang Yingchun, Liu Zhenya, Liu Zhongjie, Xue Hui, Long Qiming, Hou Ting, Wang Wenrui, Liu Yuting, Jin Zhongxin, Zhang Mengyan, Peng Yanling, Wen Jun, Gaut Brandon, Zhou Yongfeng
Abstract excerpt
Amur grape (Vitis amurensis Rupr.) is widely recognized for its cold tolerance traits and serves as a valuable genetic resource for breeding climate-resilient grape cultivars. Here, we construct a graph pangenome reference (Vampan_V1.0) and generate a variant map comprising 48,308,434 short variants and 127,094 TE-associated structural variants (TEVs) using deep resequencing data from 330 samples across 31...
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