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HGMT: a database of human gut microbiota for tumors and immunotherapy response

24 Nov 2025

Abstract excerpt

HGMT is a database designed to analyze, explore, and visualize gut microbiomes from diverse tumor types. We process metagenomic datasets from 18,630 stool samples across 37 tumor types, including 2,207 samples from immunotherapy-treated patients across 12 tumor types. HGMT provides an interactive portal for querying taxonomic and functional profiles, visualizing cross-dataset differential abundance taxa in...

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PMID: 41286929
DOI: 10.1186/s13059-025-03865-3

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