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OncoDB 2.0: a comprehensive platform for integrated pan-cancer omics analysis.

Nucleic acids research - 6 Jan 2026

Cho Minsu, Tang Gongyu, Rogers Charles S, Dove Makayla, Liu Xinyi, Li Yuanxiang, Wang Xiaowei

Abstract excerpt

OncoDB was initially developed to advance cancer research by integrating RNA expression profiles, DNA methylation patterns, clinical annotations, and oncoviral signatures derived from the Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression datasets. We now present OncoDB 2.0, an extensively expanded platform that offers a more comprehensive and integrated view of cancer omics. The updated version includes...

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Identifiers

PMID: 40995640
DOI: 10.1093/nar/gkaf952
PMCID: PMC12808538

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