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Genomic analysis of Candida auris transmission within an urban region

10 Sept 2025

Abstract excerpt

among Chicago healthcare facilities between 2016 and 2021. In total, 99% of isolates formed a single clade IV phylogenetic lineage, suggesting a single introduction. The remaining isolates were clade III. Isolates were grouped into genomic clusters based on phylogenetic clustering and relatedness. Isolates from 14 facilities were included in 77 genomic clusters with evidence of inter- and intra-facility...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 40928209
DOI: 10.1099/mgen.0.001478

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