Article
Landscape of rare-allele variants in cultivated and wild soybean genomes.
The plant genome - 1 Jun 2025
Liu Zhi, Shi Xiaolei, Yang Qing, Li Ying, Yang Chunyan, Zhang Mengchen, An Yong-Qiang Charles, Nguyen Henry T, Yan Long, Song Qijian
Abstract excerpt
Rare-allele variants are important for crop improvement because they can be linked to important traits. However, genome-wide distribution and annotation of rare-allele variants have not been reported. We analyzed sequencing data from 1556 soybean accessions and found 6,533,419 rare-allele variants in Glycine max and 941,274 in Glycine soja populations. Although the total number of variants was 20% less in G. max...
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