Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Developing pangenomes for large and complex plant genomes and their representation formats.

Journal of advanced research - 1 Dec 2025

Ruperao Pradeep, Rangan Parimalan, Shah Trushar, Sharma Vinay, Rathore Abhishek, Mayes Sean, Pandey Manish K

Abstract excerpt

BACKGROUND: The development of pangenomes has revolutionized genomic studies by capturing the complete genetic diversity within a species. Pangenome assembly integrates data from multiple individuals to construct a comprehensive genomic landscape, revealing both core and accessory genomic elements. This approach enables the identification of novel genes, structural variations, and gene presence-absence...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Crops, Agricultural
Share to DNA Copy Number Variations

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genetic Variation

Share to Genome, Plant

Share to Genomics

Share to Plants

Source

Open in PubMed Open full text

Identifiers

PMID: 39894347
DOI: 10.1016/j.jare.2025.01.052
PMCID: PMC12684929

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 1 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Developing pangenomes for large and complex plant genomes and their representation formats.PMID 39894347Read ↗

Technological Development and Advances for Constructing and Analyzing Plant Pangenomes.Semantic proximity Read ↗

Building pan-genome infrastructures for crop plants and their use in association genetics.Semantic proximity Read ↗

How the pan-genome is changing crop genomics and improvement.Semantic proximity Read ↗

The developments and prospects of plant super-pangenomes: Demands, approaches, and applications.Semantic proximity Read ↗

Graph-based pan-genomes: increased opportunities in plant genomics.Semantic proximity Read ↗

A panorama of plant pangenomes.Semantic proximity Read ↗

Plant pangenomes for crop improvement, biodiversity and evolution.Semantic proximity Read ↗

Expanding Gene-Editing Potential in Crop Improvement with Pangenomes.Semantic proximity Read ↗

Accessing crop genetic diversity via pangenomics.Semantic proximity Read ↗

High-Quality Plant Genomes for and through Pangenomics.Semantic proximity Read ↗

Exploring Pan-Genomes of Crops: Genomic Resources and Tools for Unraveling Gene Evolution, Function, and AdaptationSemantic proximity Read ↗

Super-Pangenome by Integrating the Wild Side of a Species for Accelerated Crop Improvement.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.