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Article

A pangenome analysis reveals the center of origin and evolutionary history of Phytophthora infestans and 1c clade species.

PloS one - 1 Jan 2025

Coomber Allison L, Saville Amanda C, Carbone Ignazio, Martin Michael, Bieker Vanessa C, Ristaino Jean Beagle

Abstract excerpt

We examined the evolutionary history of Phytophthora infestans and its close relatives in the 1c clade. We used whole genome sequence data from 69 isolates of Phytophthora species in the 1c clade and conducted a range of genomic analyses including nucleotide diversity evaluation, maximum likelihood trees, network assessment, time to most recent common ancestor and migration analysis. We consistently identified...

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Topics

Phytophthora infestans
Phylogeny
Evolution, Molecular
Genetic Variation
South America

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Identifiers

PMID: 39854309
DOI: 10.1371/journal.pone.0314509
PMCID: PMC11760636

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