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Exploration of low-frequency allelic variants of SARS-CoV-2 genomes reveals coinfections in Mexico occurred during periods of VOCs turnover.

Microbial genomics - 1 Mar 2024

García-López Rodrigo, Taboada Blanca, Zárate Selene, Muñoz-Medina José Esteban, Salas-Lais Angel Gustavo, Herrera-Estrella Alfredo, Boukadida Celia, Vazquez-Perez Joel Armando, Gómez-Gil Bruno, Sanchez-Flores Alejandro, Arias Carlos F

Abstract excerpt

A total of 14 973 alleles in 29 661 sequenced samples collected between March 2021 and January 2023 by the Mexican Consortium for Genomic Surveillance (CoViGen-Mex) and collaborators were used to construct a thorough map of mutations of the Mexican SARS-CoV-2 genomic landscape containing Intra-Patient Minor Allelic Variants (IPMAVs), which are low-frequency alleles not ordinarily present in a genomic consensus...

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PMID: 38512312
DOI: 10.1099/mgen.0.001220
PMCID: PMC11004493

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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