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Genomic diversity of group A rotaviruses from wild boars and domestic pigs in Japan: wide prevalence of NSP5 carrying the H2 genotype.

Archives of virology - 7 Mar 2024

Shizawa Shigeki, Fukuda Fujiko, Kikkawa Yasuhiro, Oi Toru, Takemae Hitoshi, Masuda Tsuneyuki, Ishida Hiroho, Murakami Hironobu, Sakaguchi Shoichi, Mizutani Tetsuya, Nagai Makoto, Oba Mami

Abstract excerpt

Group A rotavirus (RVA) sequences were detected in 10.8% (23/212) and 20.7% (87/421) of fecal samples collected in 2017-2022 from wild boars and domestic pigs, using next-generation sequencing. Complete genome sequence analysis of one wild boar and 13 domestic pig RVAs revealed that six of them carried the rare H2 NSP5 genotype. Out of the 39 samples for which the NSP5 genotype could be determined, 23 (59.0%)...

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PMID: 38451342
DOI: 10.1007/s00705-023-05954-9

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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