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Article

Text mining for contexts and relationships in cancer genomics literature.

Bioinformatics (Oxford, England) - 2 Jan 2024

Collins Charlotte, Baker Simon, Brown Jason, Zheng Huiyuan, Chan Adelyne, Stenius Ulla, Narita Masashi, Korhonen Anna

Abstract excerpt

MOTIVATION: Scientific advances build on the findings of existing research. The 2001 publication of the human genome has led to the production of huge volumes of literature exploring the context-specific functions and interactions of genes. Technology is needed to perform large-scale text mining of research papers to extract the reported actions of genes in specific experimental contexts and cell states, such as...

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Identifiers

PMID: 38258418
DOI: 10.1093/bioinformatics/btae021
PMCID: PMC10822582

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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