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Pan-genome analysis of 13 Malus accessions reveals structural and sequence variations associated with fruit traits.

Nature communications - 15 Nov 2023

Wang Ting, Duan Shiyao, Xu Chen, Wang Yi, Zhang Xinzhong, Xu Xuefeng, Chen Liyang, Han Zhenhai, Wu Ting

Abstract excerpt

Structural variations (SVs) and copy number variations (CNVs) contribute to trait variations in fleshy-fruited species. Here, we assemble 10 genomes of genetically diverse Malus accessions, including the ever-green cultivar 'Granny Smith' and the widely cultivated cultivar 'Red Fuji'. Combining with three previously reported genomes, we assemble the pan-genome of Malus species and identify 20,220 CNVs and 317,393...

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Identifiers

PMID: 37968318
DOI: 10.1038/s41467-023-43270-7
PMCID: PMC10651928

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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