Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Detection of trait donors and QTL boundaries for early blight resistance using local ancestry inference in a library of genomic sequences for tomato.

The Plant journal : for cell and molecular biology - 1 Jan 2024

Anderson Taylor A, Sudermann Martha A, DeJong Darlene M, Francis David M, Smart Christine D, Mutschler Martha A

Abstract excerpt

By conducting hierarchical clustering along a sliding window, we generated haplotypes across hundreds of re-sequenced genomes in a few hours. We leveraged our method to define cryptic introgressions underlying disease resistance in tomato (Solanum lycopersicum L.) and to discover resistant germplasm in the tomato seed bank. The genomes of 9 accessions with early blight (Alternaria linariae) disease resistance...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Disease Resistance
Share to Genomics

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Phenotype

Share to Plant Diseases

Share to Quantitative Trait Loci

Share to Solanum lycopersicum

Source

Identifiers

PMID: 37856521
DOI: 10.1111/tpj.16495

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Detection of trait donors and QTL boundaries for early blight resistance using local ancestry inference in a library of genomic sequences for tomato.PMID 37856521Read ↗

Beyond SNPs: Scalable Detection of Structural Variants Unlocks Hidden Genetic Diversity in TomatoSemantic proximity Read ↗

Use of modern tomato breeding germplasm for deciphering the genetic control of agronomical traits by Genome Wide Association study.Semantic proximity Read ↗

Potential of a tomato MAGIC population to decipher the genetic control of quantitative traits and detect causal variants in the resequencing era.Semantic proximity Read ↗

Leveraging Structural Variants to Unlock Hidden Genetic Diversity for Tomato Crop ImprovementSemantic proximity Read ↗

Rapid identification of candidate genes for resistance to tomato late blight disease using next-generation sequencing technologies.Semantic proximity Read ↗

Transcriptome-Assisted SNP Marker Discovery for Phytophthora infestans Resistance in Solanum lycopersicum L.Semantic proximity Read ↗

QTL mapping in salad tomatoesSemantic proximity Read ↗

Genome Wide Association Study Reveals Novel Loci Controlling Agronomic Traits in Tomato (Solanum lycopersicum L.).Semantic proximity Read ↗

Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping.Semantic proximity Read ↗

Mapping QTLs conferring early blight (Alternaria solani) resistance in a Lycopersicon esculentum x L. hirsutum cross by selective genotypingSemantic proximity Read ↗

Genomic analyses provide insights into the history of tomato breeding.Semantic proximity Read ↗

Super Pangenome of Grapevines Empowers Improvement of the Oldest Domesticated FruitSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.