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A Core Genome Multilocus Sequence Typing Scheme for Proteus mirabilis.

Biomedical and environmental sciences : BES - 20 Apr 2023

Chen Sheng Lin, Kang Yu Tong, Liang Yi He, Qiu Xiao Tong, Li Zhen Jun

Abstract excerpt

Objective: A core genome multilocus sequence typing (cgMLST) scheme to genotype and identify potential risk clonal groups (CGs) in Proteus mirabilis. Methods: In this work, we propose a publicly available cgMLST scheme for P. mirabilis using chewBBACA. In total 72 complete P. mirabilis genomes, representing the diversity of this species, were used to set up a cgMLST scheme targeting 1,842 genes, 635 unfinished...

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PMID: 37105909
DOI: 10.3967/bes2023.040

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