Article
Genome wide mining of SNPs and INDELs through ddRAD sequencing in Sahiwal cattle.
Animal biotechnology - 1 Dec 2023
Raja Thiruvothur Venkatesan, Alex Rani, Singh Umesh, Kumar Sushil, Das Achintya Kumar, Sengar Gyanendra, Singh Amit Kumar
Abstract excerpt
The study was conducted in Sahiwal cattle for genome wide identification and annotation of single nucleotide polymorphisms (SNPs) and insertions and deletions (INDELs) in Sahiwal cattle. The double digest restriction-site associated DNA (ddRAD) sequencing, a reduced representation method was used for the identification of variants at nucleotide level. A total of 1,615,211 variants were identified at RD10 and Q30...
Topics
- Cattle
- Animals
- Polymorphism, Single Nucleotide
- Genome
- Phenotype
- Base Sequence
- Nucleotides