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Whole genome sequencing of simmental cattle for SNP and CNV discovery.

BMC genomics - 5 Apr 2023

Sun Ting, Pei Shengwei, Liu Yangkai, Hanif Quratulain, Xu Haiyue, Chen Ningbo, Lei Chuzhao, Yue Xiangpeng

Abstract excerpt

BACKGROUD: The single nucleotide polymorphisms (SNPs) and copy number variations (CNVs) are two major genomic variants, which play crucial roles in evolutionary and phenotypic diversity. RESULTS: In this study, we performed a comprehensive analysis to explore the genetic variations (SNPs and CNVs) of high sperm motility (HSM) and poor sperm motility (PSM) Simmental bulls using the high-coverage (25×) short-read...

Topics

Male
Cattle
Animals
Polymorphism, Single Nucleotide
DNA Copy Number Variations
Sperm Motility
Quantitative Trait Loci
Whole Genome Sequencing

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Identifiers

PMID: 37020271
DOI: 10.1186/s12864-023-09248-x
PMCID: PMC10077681

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 31 Aug 2026.

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