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Haplotype analysis of genomic prediction by incorporating genomic pathway information based on high-density SNP marker in Chinese yellow-feathered chicken.

Poultry science - 1 May 2023

Ye Haoqiang, Xu Zhenqiang, Bello Semiu Folaniyi, Zhu Qianghui, Kong Shaofen, Zheng Ming, Fang Xiang, Jia Xinzheng, Xu Haiping, Zhang Xiquan, Nie Qinghua

Abstract excerpt

Genomic selection using single nucleotide polymorphism (SNP) markers is now intensively investigated in breeding and has been widely utilized for genetic improvement. Currently, several studies have used haplotype (consisting of multiallelic SNPs) for genomic prediction and revealed its performance advantage. In this study, we comprehensively evaluated the performance of haplotype models for genomic prediction in...

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Chickens
Genomics
Genotype
Haplotypes
Linkage Disequilibrium

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Models, Genetic

Polymorphism, Single Nucleotide

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PMID: 36907129
DOI: 10.1016/j.psj.2023.102549
PMCID: PMC10024239

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