Replacement of microsatellite markers by imputed medium-density SNP arrays for parentage control in German warmblood horses.

doi:10.1007/s13353-022-00725-9

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Article

Replacement of microsatellite markers by imputed medium-density SNP arrays for parentage control in German warmblood horses.

Journal of applied genetics - 1 Dec 2022

Nolte Wietje, Alkhoder Hatem, Wobbe Mirell, Stock Kathrin F, Kalm Ernst, Vosgerau Sarah, Krattenmacher Nina, Thaller Georg, Tetens Jens, Kühn Christa

Abstract excerpt

In horses, parentage control is currently performed based on an internationally standardized panel of 17 microsatellite (MS) markers comprising 12 mandatory and five optional markers. Unlike MS, single nucleotide polymorphism (SNP) profiles support a wider portfolio of genomic applications, including parentage control. A transition to SNP-based parentage control is favorable, but requires additional efforts for...

Topics

Horses
Animals
Polymorphism, Single Nucleotide
Genotype
Genome
Genomics
Microsatellite Repeats

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Identifiers

PMID: 36173533
DOI: 10.1007/s13353-022-00725-9
PMCID: PMC9637052

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