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Article

Untangling an AGS Outbreak Caused by the Recombinant GII.12[P16] Norovirus With Nanopore Sequencing.

Frontiers in cellular and infection microbiology - 1 Jan 2022

Xiong Qianling, Jiang Huimin, Liu Zhe, Peng Jinju, Sun Jing, Fang Ling, Li Caixia, Qiu Ming, Zhang Xin, Lu Jing

Abstract excerpt

For a rapidly spreading virus such as NoV (norovirus), pathogen identification, genotype classification, and transmission tracing are urgent for epidemic control. Here, we applied the Nanopore metatranscriptomic sequencing to determine the causative pathogen of a community AGS (Acute gastroenteritis) outbreak. The results were also confirmed by RT-PCR. The NGS (Next Generation Sequencing) library was constructed...

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PMID: 35865812
DOI: 10.3389/fcimb.2022.911563
PMCID: PMC9294139

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