Article
Assessing putative bias in prediction of anti-microbial resistance from real-world genotyping data under explicit causal assumptions.
Artificial intelligence in medicine - 1 Aug 2022
Prosperi Mattia, Boucher Christina, Bian Jiang, Marini Simone
Abstract excerpt
Whole genome sequencing (WGS) is quickly becoming the customary means for identification of antimicrobial resistance (AMR) due to its ability to obtain high resolution information about the genes and mechanisms that are causing resistance and driving pathogen mobility. By contrast, traditional phenotypic (antibiogram) testing cannot easily elucidate such information. Yet development of AMR prediction tools from...
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