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Article

Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period.

Genome medicine - 5 May 2021

Royer Guilhem, Darty Mélanie Mercier, Clermont Olivier, Condamine Bénédicte, Laouenan Cédric, Decousser Jean-Winoc, Vallenet David, Lefort Agnès, de Lastours Victoire, Denamur Erick

Abstract excerpt

BACKGROUND: Escherichia coli is the leading cause of bloodstream infections, associated with a significant mortality. Recent genomic analyses revealed that few clonal lineages are involved in bloodstream infections and captured the emergence of some of them. However, data on within sequence type (ST) population genetic structure evolution are rare. METHODS: We compared whole genome sequences of 912 E. coli...

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Identifiers

PMID: 33952335
DOI: 10.1186/s13073-021-00892-0
PMCID: PMC8097792

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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