Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Phylogenomics reveals viral sources, transmission, and potential superinfection in early-stage COVID-19 patients in Ontario, Canada.

Scientific reports - 12 Feb 2021

Sjaarda Calvin P, Rustom Nazneen, Evans Gerald A, Huang David, Perez-Patrigeon Santiago, Hudson Melissa L, Wong Henry, Sun Zhengxin, Guan T Hugh, Ayub Muhammad, Soares Claudio N, Colautti Robert I, Sheth Prameet M

Abstract excerpt

The emergence and rapid global spread of SARS-CoV-2 demonstrates the importance of infectious disease surveillance, particularly during the early stages. Viral genomes can provide key insights into transmission chains and pathogenicity. Nasopharyngeal swabs were obtained from thirty-two of the first SARS-CoV-2 positive cases (March 18-30) in Kingston Ontario, Canada. Viral genomes were sequenced using Ion Torrent...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Aged, 80 and over
Share to COVID-19

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to Mutation, Missense

Share to Ontario

Share to Phylogeny

Share to SARS-CoV-2

Share to Spike Glycoprotein, Coronavirus

Source

Open in PubMed Open full text

Identifiers

PMID: 33580132
DOI: 10.1038/s41598-021-83355-1
PMCID: PMC7881023

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Phylogenomics reveals viral sources, transmission, and potential superinfection in early-stage COVID-19 patients in Ontario, Canada.PMID 33580132Read ↗

Chasing the origin of SARS-CoV-2 in Canada’s COVID-19 cases: A genomics studySemantic proximity Read ↗

Temporal Dynamics and Evolution of SARS-CoV-2 Demonstrate the Necessity of Ongoing Viral Genome Sequencing in Ontario, Canada.Semantic proximity Read ↗

Genomic characterization and evolution of SARS-CoV-2 of a Canadian population.Semantic proximity Read ↗

Clinical utility of SARS-CoV-2 whole genome sequencing in deciphering source of infectionSemantic proximity Read ↗

Two mutations in the SARS-CoV-2 spike protein and RNA polymerase complex are associated with COVID-19 mortality riskSemantic proximity Read ↗

Genomic epidemiology and associated clinical outcomes of a SARS-CoV-2 outbreak in a general adult hospital in QuebecSemantic proximity Read ↗

Analysis of 329,942 SARS-CoV-2 records retrieved from GISAID database.Semantic proximity Read ↗

Comparative Household Secondary Attack Rates associated with B.1.1.7, B.1.351, and P.1 SARS-CoV-2 VariantsSemantic proximity Read ↗

Phylogeogenomic analysis of the earliest reported sequences of SARS-CoV-2 from 161 countries.Semantic proximity Read ↗

Genetic Analysis Tracks SARS-CoV-2 Mutations in Human Hosts.Semantic proximity Read ↗

Multiple Mutations Associated with Emergent Variants Can Be Detected as Low-Frequency Mutations in Early SARS-CoV-2 Pandemic Clinical Samples.Semantic proximity Read ↗

Emergence and Spread of SARS-CoV-2 Variants of Concern in Canada: a Retrospective Analysis from Clinical and Wastewater DataSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.