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Viral variant visualizer (VVV): A novel bioinformatic tool for rapid and simple visualization of viral genetic diversity.

Virus research - 2 Jan 2021

Flageul Alexandre, Lucas Pierrick, Hirchaud Edouard, Touzain Fabrice, Blanchard Yannick, Eterradossi Nicolas, Brown Paul, Grasland Béatrice

Abstract excerpt

Here a bioinformatic pipeline VVV has been developed to analyse viral populations in a given sample from Next Generation Sequencing (NGS) data. To date, handling large amounts of data from NGS requires the expertise of bioinformaticians, both for data processing and result analysis. Consequently, VVV was designed to help non-bioinformaticians to perform these tasks. By providing only the NGS data file, the...

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PMID: 33080244
DOI: 10.1016/j.virusres.2020.198201

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