Article
Comparisons of sampling methods for assessing intra- and inter-accession genetic diversity in three rice species using genotyping by sequencing.
Scientific reports - 19 Aug 2020
Gouda Arnaud Comlan, Ndjiondjop Marie Noelle, Djedatin Gustave L, Warburton Marilyn L, Goungoulou Alphonse, Kpeki Sèdjro Bienvenu, N'Diaye Amidou, Semagn Kassa
Abstract excerpt
To minimize the cost of sample preparation and genotyping, most genebank genomics studies in self-pollinating species are conducted on a single individual to represent an accession, which may be heterogeneous with larger than expected intra-accession genetic variation. Here, we compared various population genetics parameters among six DNA (leaf) sampling methods on 90 accessions representing a wild species (O....
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