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Article

Comparison of core-genome MLST, coreSNP and PFGE methods for Klebsiella pneumoniae cluster analysis.

Microbial genomics - 1 Apr 2020

Gona Floriana, Comandatore Francesco, Battaglia Simone, Piazza Aurora, Trovato Alberto, Lorenzin Giovanni, Cichero Paola, Biancardi Anna, Nizzero Paola, Moro Matteo, Cirillo Daniela Maria

Abstract excerpt

In this work we compared the most frequently used Klebsiella pneumoniae typing methods: PFGE, cgMLST and coreSNP. We evaluated the discriminatory power of the three methods to confirm or exclude nosocomial transmission on K. pneumoniae strains isolated from January to December 2017, in the framework of the routine surveillance for multidrug-resistant organisms at the San Raffaele Hospital, in Milan. We compared...

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Identifiers

PMID: 32149598
DOI: 10.1099/mgen.0.000347
PMCID: PMC7276701

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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