Article
Method for Genome-Wide Association Study: A Soybean Example.
Methods in molecular biology (Clifton, N.J.) - 1 Jan 2020
Anderson Robyn, Fernandez Cassandria Tay, Yuan Yuxuan, Golicz Agnieszka A, Edwards David, Bayer Philipp E
Abstract excerpt
Genome-wide association studies (GWAS) are a valuable approach to identify single nucleotide polymorphisms (SNPs) associated with a phenotype of interest. There are now a variety of R-packages and command line tools available to perform GWAS. Here, we provide an example downloading and filtering SNP data, followed by GWAS analysis using the R-package rMVP.
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