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Whole genome sequencing and bioinformatics analysis of two Egyptian genomes.

Gene - 20 Aug 2018

ElHefnawi Mahmoud, Jeon Sungwon, Bhak Youngjune, ElFiky Asmaa, Horaiz Ahmed, Jun JeHoon, Kim Hyunho, Bhak Jong

Abstract excerpt

We report two Egyptian male genomes (EGP1 and EGP2) sequenced at ~ 30× sequencing depths. EGP1 had 4.7 million variants, where 198,877 were novel variants while EGP2 had 209,109 novel variants out of 4.8 million variants. The mitochondrial haplogroup of the two individuals were identified to be H7b1 and L2a1c, respectively. We also identified the Y haplogroup of EGP1 (R1b) and EGP2 (J1a2a1a2 > P58 > FGC11). EGP1...

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Identifiers

PMID: 29775755
DOI: 10.1016/j.gene.2018.05.048

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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