Article
Modeling the ACMG/AMP variant classification guidelines as a Bayesian classification framework.
Genetics in medicine : official journal of the American College of Medical Genetics - 1 Sept 2018
Tavtigian Sean V, Greenblatt Marc S, Harrison Steven M, Nussbaum Robert L, Prabhu Snehit A, Boucher Kenneth M, Biesecker Leslie G
Abstract excerpt
PURPOSE: We evaluated the American College of Medical Genetics and Genomics/Association for Molecular Pathology (ACMG/AMP) variant pathogenicity guidelines for internal consistency and compatibility with Bayesian statistical reasoning. METHODS: The ACMG/AMP criteria were translated into a naive Bayesian classifier, assuming four levels of evidence and exponentially scaled odds of pathogenicity. We tested this...
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