Article
Development of a simple and practical method of discrimination between Vibrio furnissii and V. fluvialis based on single-nucleotide polymorphisms of 16S rRNA genes observed in V. furnissii but not in V. fluvialis.
Journal of microbiological methods - 1 Jan 2018
Takajo Ichiro, Yamada Akiteru, Umeki Kazumi, Saeki Yuji, Hashikura Yuuki, Yamamoto Ikuo, Umekita Kunihiko, Urayama-Kawano Midori, Yamasaki Shogo, Taniguchi Takako, Misawa Naoaki, Okayama Akihiko
Abstract excerpt
Vibrio furnissii and V. fluvialis are closely related, the discrimination of which by conventional biochemical assay remains a challenge. Investigation of the sequence of the 16S rRNA genes in a clinical isolate of V. furnissii by visual inspection of a sequencing electropherogram revealed two sites of single-nucleotide polymorphisms (SNPs; positions 460 A/G and 1261 A/G) in these genes. A test of 12 strains each...
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