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Gene-centric metegenome analysis reveals diversity of Pseudomonas aeruginosa biofilm gene orthologs in fresh water ecosystem.

Genomics - 1 Mar 2018

Anupama Rani, Mukherjee Amitava, Babu Subramanian

Abstract excerpt

Metagenomic analysis of biofilm forming bacteria in environmental samples remains challenging due to the non-availability of gene sequences of most of the uncultivable bacteria. Sequences of Pseudomonas aeruginosa PAO1-UW genes involved either directly or indirectly in biofilm formation were analyzed using BLASTn to obtain matching sequences from different strain, species and genus. Conserved regions in the...

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PMID: 28882736
DOI: 10.1016/j.ygeno.2017.08.010

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