Article
Using ALoFT to determine the impact of putative loss-of-function variants in protein-coding genes.
Nature communications - 29 Aug 2017
Balasubramanian Suganthi, Fu Yao, Pawashe Mayur, McGillivray Patrick, Jin Mike, Liu Jeremy, Karczewski Konrad J, MacArthur Daniel G, Gerstein Mark
Abstract excerpt
Variants predicted to result in the loss of function of human genes have attracted interest because of their clinical impact and surprising prevalence in healthy individuals. Here, we present ALoFT (annotation of loss-of-function transcripts), a method to annotate and predict the disease-causing potential of loss-of-function variants. Using data from Mendelian disease-gene discovery projects, we show that ALoFT...
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