Article
Development of a 690 K SNP array in catfish and its application for genetic mapping and validation of the reference genome sequence.
Scientific reports - 12 Jan 2017
Zeng Qifan, Fu Qiang, Li Yun, Waldbieser Geoff, Bosworth Brian, Liu Shikai, Yang Yujia, Bao Lisui, Yuan Zihao, Li Ning, Liu Zhanjiang
Abstract excerpt
Single nucleotide polymorphisms (SNPs) are capable of providing the highest level of genome coverage for genomic and genetic analysis because of their abundance and relatively even distribution in the genome. Such a capacity, however, cannot be achieved without an efficient genotyping platform such as SNP arrays. In this work, we developed a high-density SNP array with 690,662 unique SNPs (herein 690 K array)...
Topics
- Animals
- Base Sequence
- Catfishes
- Chromosome Mapping
- Female
- Genetic Markers
- Genome
- Male
- Polymorphism, Single Nucleotide
- Reference Standards
- Reproducibility of Results