Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Sybr Green- and TaqMan-Based Quantitative PCR Approaches Allow Assessment of the Abundance and Relative Distribution of Frankia Clusters in Soils.

Applied and environmental microbiology - 1 Mar 2017

Ben Tekaya Seifeddine, Ganesan Abirama Sundari, Guerra Trina, Dawson Jeffrey O, Forstner Michael R J, Hahn Dittmar

Abstract excerpt

The nodule-forming actinobacterial genus Frankia can generally be divided into 4 taxonomic clusters, with clusters 1, 2, and 3 representing nitrogen-fixing strains of different host infection groups and cluster 4 representing atypical, generally non-nitrogen-fixing strains. Recently, quantitative PCR (qPCR)-based quantification methods have been developed for frankiae of clusters 1 and 3; however, similar...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Betula
Share to RNA, Ribosomal, 23S

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Root Nodules, Plant

Share to Sequence Analysis

Share to Soil Microbiology

Share to Symbiosis

Source

Open in PubMed Open full text

Identifiers

PMID: 27986724
DOI: 10.1128/AEM.02833-16
PMCID: PMC5311412

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Sybr Green- and TaqMan-Based Quantitative PCR Approaches Allow Assessment of the Abundance and Relative Distribution of Frankia Clusters in Soils.PMID 27986724Read ↗

Diversity of frankiae in soils from five continents.Semantic proximity Read ↗

Diversity of Frankia in soil assessed by Illumina sequencing of nifH gene fragments.Semantic proximity Read ↗

Molecular diversity of Frankia in root nodules of Alnus incana grown with inoculum from polluted urban soils.Semantic proximity Read ↗

Diversity of frankiae in root nodules of Morella pensylvanica grown in soils from five continents.Semantic proximity Read ↗

Frankia and Alnus rubra canopy roots: an assessment of genetic diversity, propagule availability, and effects on soil nitrogen.Semantic proximity Read ↗

Plant diversity and plant identity influence Fusarium communities in soil.Semantic proximity Read ↗

Diversity patterns of Rhizobiaceae communities inhabiting soils, root surfaces and nodules reveal a strong selection of rhizobial partners by legumes.Semantic proximity Read ↗

Endophytic bacterial diversity in the roots of medicinal rice in KeralaSemantic proximity Read ↗

Aspects of nitrogen-fixing Actinobacteria, in particular free-living and symbiotic Frankia.Semantic proximity Read ↗

Harnessing the Synergy of Urochloa brizantha and Amazonian Dark Earth Microbiomes for Enhanced Pasture RecoverySemantic proximity Read ↗

An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH.Semantic proximity Read ↗

Genotypic Identification of Trees Using DNA Barcodes and Microbiome Analysis of Rhizosphere Microbial Communities.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.